Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKYYDSNNIFAQILRGELPCKKVYEDEDVLAFYDKYPDAPVHILVVPKSQYISYDDFIFKASAEEIVGFFKTVREITYKYNL-----EKTGYRLVTNCGENGEQVVPHFHMHILGGKRLGKHVNL
3OXK Chain:A ((10-113))
----------IFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEI-----TEENEAF---IGKVLYKVSLIGKKECPEGYRVVNNIGEDAGQTVKHIHFHILGGKKLAWDKL-
General information:
TITO was launched using:
RESULT:
Template:
3OXK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65707 for 652 contacts (-100.8/contact) +
2D Compatibility (PS) -10901 + (NN) -8693 + (LL) 912
1D Compatibility (HY) -10000 + (ID) 2250
Total energy: -96639.0 ( -148.22 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3OXK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXK-query.scw
PDB file :
Tito_Scwrl_3OXK.pdb
: