Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLLINNFDELFHLVNCSKEDH-TKELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKT--PLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIG---LTNKLRAYDMQRKYNLD---TVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
| 1D9E Chain:A ((1-284)) | -----MKQKVVSIG--------DINVANDLPFVLFGGMNVLE------------------SRDLAMRICEHYVTVTQKLGIP----YVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVH--EPSQAQPVADVVDVIQLPAFLA---RQTDLVEAMAKTGAVINVKKPQFVS------------------------------------------------PGQMGNIVDKFKEGGNEKVILCDR-GANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQRA----QVAELARAGMAVGLAGLFIEAHPDPEPSALPLAKLE--PFLKQMKAIDDLVKGFEELDTSK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102227 for 2141 contacts (-47.7/contact) +
2D Compatibility (PS) -27558 + (NN) -7868 + (LL) 5400
1D Compatibility (HY) -9600 + (ID) 2050
Total energy: -143903.0 ( -67.21 by residue)
QMean score : 0.239
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