Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGIPNKLDPHEPENLAKAIKKLNLKYVVITSVDRDDLPDGGASQFIKCIEEIRKITPETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMVP-RLYARIRPR--ARYFHSLYLLKMVKQINPKLLTKSGLM--VGL----GETKEEVLQVMDDLRSAEVDFITIGQYLQPTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
| 2CW6 Chain:A ((23-175)) | ---------------------------------------------------------------------------IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQ-MGDHTEVLKGIQKF-PGINYPVLTP----NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS--ANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50340 for 1039 contacts (-48.5/contact) +
2D Compatibility (PS) -15439 + (NN) -7133 + (LL) 4812
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -72400.0 ( -69.68 by residue)
QMean score : 0.327
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