Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MEAVVKELAHPLFSAAGIDDNWIRVFIINDNSINAFVINNNSIFIHLGLLQYSTEPYALLSILAHEIAHISAGHISQMSSAVGYFQSIAIVSYMVGLISTIIINPQIASAILLSGMTLSSRLFFNYSQEQESVADSYALKYLDESGYDNLGMKEVFDYFRGIEHENAEGYFRTHPLSSKRIFAVQNYKVKNEVKPILVDKLLRFKRMVAKLDSFFSPIHVLSNKYEDNSEYVSAVIYYRQGKIKKAIAKVNSLIQESSNDPYLYELKAEMLYKTGNLNEAVKMYEESLKYLSEKNSYLVKLALSHALLLYGDIKKAIFHLEQIVSVEPNNAFVWKHLGIAYKCDANIAMHYFALTKKACIEGNLKQFVKYAELAVRNLPK-DSPYLLQIEDMKRFNE |
| 1W3B Chain:B ((1-388)) | GPMELAHREYQAGDFEAA---ERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAH-FSTLAIKQNPLLAEAYSNLGNVYKERGQLQE-AIEHYRHALRLK---PDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKA------LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA------------RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL--QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSYRKALEVFP---EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71285 for 2947 contacts (-24.2/contact) +
2D Compatibility (PS) -39340 + (NN) -19228 + (LL) 2756
1D Compatibility (HY) -5200 + (ID) 3100
Total energy: -135397.0 ( -45.94 by residue)
QMean score : 0.272
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