Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEVGAGTLHPATIMSA--ID--VKPTKIAYLQ-PVVRPADGRYGDNPNRLYQHHQYQVIIKPSGN-------NLQDVYLSSLRALGISTE---KYDIKFIEDD-WENPSVGAS---GLGWEVTCN----------GMEVTQLTYIQ-QIG---SINC----RIIPGEVAYGLERLAMCIQGVNNVYDIIWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 3W3S Chain:A ((315-490)) | ----------------------------APAQCEPFYELLRDEVVDPERLPIKLYDCSGWTYRWEGGAA-KGLERVNEFQRIEHVWIAEPEEAYRIRRELLEATKRVAEELELEWKVVVSDDPFYLEGRLLEDRDIELPDVPSYEFEVYLPFKGERSSEEAWISVGSFNVHGEHFVDGFNVKEKSGRTLFTGCAGLGVTRWVVGLLAQHGFYPYEWPEPILERIDEKFGGLPEVPKTLTWPE-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53837 for 927 contacts (-58.1/contact) +
2D Compatibility (PS) -14938 + (NN) 1160 + (LL) 7404
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -67511.0 ( -72.83 by residue)
QMean score : 0.311
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