Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLELKNKISAEAPKTDPSLAGVAANAILDVLGAVPSKPLRVQAELYKKESNNEEMDHTRDSGINNQSSGIKKSASEGTLFSESWDSKKTSGDWKRLLDNKPGDGSDTPPTPFTPKDDSYIENSETDSTTPLISSGKKTNRVWPRVKYAMQQKGVIIFGAN-----TIILCTSLALVYLQDKAKFIVFFANSPFYITILVIASASLFAVSPIFHIIKQFRDAEEYQIQKGNANEILDKVLECQPRDKVIKSVRLEYSNDTHSNFALNAWEAKDNFINIGEKVISRANKIESIINNRPLFIALLTSVVAANIAFPLGLLAIDGINNVQKFYQNPLTHNVGLSLFIGSGILALSIICLGVHYYRKTNCTNLIYSQEKINTESVNKKFIKKIEQERTNVLKDNHGKDAKCISLTLEQVVVQSHNCKDIVYSIGE |
| 4RHJ Chain:A ((19-318)) | SHMFSKFLMNVKGVTPRGSDWANRLGPVALFGYGAGMPRRAPLLDFFL------QSPRDCDHYAELTIHDKGPIECPPETVMFMPVLNCGQ-------MLDEAAGTE--------TPTSDEWYLGSLEASTELL-------------------EKGYVPVSVGGDGSATLSMVEAYKRLFPSDDIVIVHF--------------SARPSVSDP-----------------RSPLRVLLDK--------GLLKGVVSV-GNRQVSSEDRKVRKLHKMFYM----------DMRDIRNDYPVFISIDASVLDPAFAPAVDSPVAGGLS------TRDLLHIMN-------GIRGPKVVGIDVYGYN----------------------------PDLDVYRKDNVGLTAIALSKIIKEGILK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84160 for 2358 contacts (-35.7/contact) +
2D Compatibility (PS) -28544 + (NN) 1136 + (LL) 9744
1D Compatibility (HY) -12000 + (ID) 2750
Total energy: -116574.0 ( -49.44 by residue)
QMean score : 0.255
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