Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKYKNIGYVASES-PKS-QEVSKLLQKLNFIN--ITE---ENKSEVDLLVVVGGDGLMLHTLHNYVVGNKDIHVYGVNTGSVGFLMNKYFSSSEDLIDNIEHATSAQLTLLKMEAIDLSGKKYHHVAVNEVYVFRK-ANQIVEMNVAINSKLKMEKFRGDGIILSTPTGSTAYNFSAGGPILPLNSNLFALTSINSYYPRHWNGALISNDTIVQIDINNAQNRPALVVSDYKELHNISQIKMQKDHENTVTLLFDKDYSLDERIFDRQFLY |
| 1YT5 Chain:A ((1-252)) | ----MKIAILYREEREKEGEFLKEKISK-EHEVIEFGEANAPGRVTADLIVVVGGDGTVLKAAKKAA---DGTPMVGFKAGRLGFLTSYTLDEIDRFLEDLRNWNFREETRWFIQIESEL---GNHLALNDVTLERDLSGKMVEIEVEVEHH-SSMWFFADGVVISTPTGSTAYSLSIGGPIIFPECEVLEISPIAPQFFL-TRSVVIPSNFKVVVESQ----RDINMLVDGVLTGKTKRIEVKKS-RRYVRILRPPEYDYVTV-IRDKLGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139526 for 1997 contacts (-69.9/contact) +
2D Compatibility (PS) -26893 + (NN) -7681 + (LL) 1052
1D Compatibility (HY) -12800 + (ID) 2800
Total energy: -188648.0 ( -94.47 by residue)
QMean score : 0.504
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