Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIPKVSLCINGSTNLTQYITEVRKFPMLSQEEEVRLAKSWNQCKDISSAHKLITSHLNLVVKIAMKFKNYGLLLMDLIMEGNMGLIHAVKKFNPDLGFRFSTYAVWWIEASIKDFILKSWSFVKIGTTQAQRRLFFSLRKIKKRILQYTNRETLNNEEIKAISNELSVSEGDVIQMNYRLACKDQSLNNCIKVGGDSKKEL-QDMIPCNSVNQEVTYQNREEKELKETILNNALASLNERSRDIFISR--YLSENTQTLDELSKKYCVSRERIRQLAEQAMSKVKQHIQSESLKFSLHA |
4Q4Z Chain:F ((182-411)) | -----------------------------------------------AARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVE--TINKLSRTARQLQQELGREPTYEEIAEAMGPGWDAKR---VEETLKIAQEPVSLETPI---GDEKDSFYGDFIPDEHLPSPVDAAT---QSLLSEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAFFGVTRERIRQIENKALRKLKYHESRTRKLRDFLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75065 for 1393 contacts (-53.9/contact) +
2D Compatibility (PS) -24308 + (NN) -9391 + (LL) 4368
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -120546.0 ( -86.54 by residue)
QMean score : 0.556
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