Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQKQSKSVAIWLFLCSIMIVLMVGIGGFTRLSKAGLSITEWNPITGAFPPLNERDWLQEKSKYETTPEYKTFNYGMSMEEFRTLYLIEYVHRLFARLTGLIFI--LPFIYFTLKKRISKKVVIRLSIALSFGVLQAFTGW--------YMVKSGLVAKPHVSHYMLTLHLLLALVIFALLSYQFFNYQVRQKQTKLKISGSTVHYVGIILILIVVQIIFGAFVAGLNAGLIYNTFPLMGGHIIPKDLFFLQPTWLNIFENRATVQFIHRTLALLILVLTTVLTIKNASVKSVYVMLLSVIIQIILGVVTLLLHIPITIAISHQMFSFILFGSGLCFLCYLRKQN |
| 1G3P Chain:? ((92-217)) | -----------------------------EYGDTPIPGYTYINPLDGTYPPGTEQNPANPNPSLEESQPLNTFMF--------QNNRFRNRQGALTVYTGTVTQGTDPVKTYYQYTPVSSKAMYDAYWNGKFRDCAFHSGFNEDIFVCEYQGQSSDLPQPPVNA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G3P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12221 for 717 contacts (-17.0/contact) +
2D Compatibility (PS) -12030 + (NN) 320 + (LL) 22352
1D Compatibility (HY) 10400 + (ID) 550
Total energy: 8271.0 ( 11.54 by residue)
QMean score : -0.195
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