Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKWLDIENIAEALEEKFPGEDIVNIR-------------FTKLKEKVLNLEGFS-D-DEKRCNEKILEAIQAAWIEERS-
3HGL Chain:A ((1-78))
GAVAHANSIVQQLVSE--GADISHTRNMLRNAMNGDAVAFSRVEQNIFRQHFPNMPMHGISRDSELAIELRGALRRAVHQ
General information:
TITO was launched using:
RESULT:
Template:
3HGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15036 for 351 contacts (42.8/contact) +
2D Compatibility (PS) -6557 + (NN) -5257 + (LL) -8
1D Compatibility (HY) 1200 + (ID) 400
Total energy: 4014.0 ( 11.44 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_3HGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HGL-query.scw
PDB file :
Tito_Scwrl_3HGL.pdb
: