Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVCGPTVYDTAHIGNARSIVVYDVLFQLLKFCYGKATYVRNITDIDDKIINAANEKDSSIESISTYYTRAFHEDMRSINCVEPTHEPKAA--ENIKYIIELIEYLLQSGHAYESNKHIYFSIESYPEYGA--------------LSGKKIDELEH-GSRVE-------V-GENKKHPGDF------VLWKP-ANDTDYKLSSYWNS-PWGEGRPGWHIEC-----SAMSYAY------------L--GKDFDIHGGGIDLQFPHHENEIAQNKSAFAGSMFAKYWVHNGSLTVNKEKMSKSLFNIVKVRDLLDSGIKGEVIRYALFKT-HYRKPLDWTESVISESQE--TLNKFYRLLRGIDV-ASI-----------------E--KSDVEVSRDFIETLKNDLNIPEALAILHEMATKINKTNNENEKLKLTESFIKSARFIGLLESSYQEWFTAGISYQEIKRLIDLRKVAKQNKDYDAADKIRDQLKQMGVTISDNEDGTTTW |
2X1L Chain:A ((16-439)) | ITTAIAYPNGVPHIGHAYEYIATDAIARFKRLDGYDVRYLTGTDVHGQKMAETAAKEGIPAAELARRNSDVFQRLQEKLNIS-FDRFIRTSDADHYEASKAIWKRMADAGDIYLDAYKGWYSIRDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYEEHPEFIGPDARRNEIVSFVSGGLKDLSISRTTFDWGVPVPDHPDHVMYVWVDALTNYLTGVGFPDTESESFRRYWPADLHMIGKDIIRFHTVYWPAFLMSA--GLPLPKRIFAHGWLLNRGEKMSKSIGNVVDPVNLVDT-FGLDQVRYFLLREVPFGQDGSYNEDAIIGRVNADLANELGNLAQRSLSMVAKNLGAAVPDPGEFTDEDTALLAAADALLERVREHF-DVPAMHLALEAIWSVLGAANRYFSAQEPWVLRKSDAAEDQQRFRTVLYTTLEVVRIASLLLQPVMPESTAKLLDLLGQPTDERDFSAIANRIKPGTSLPAPSGIF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95299 for 2556 contacts (-37.3/contact) +
2D Compatibility (PS) -36930 + (NN) -17233 + (LL) 272
1D Compatibility (HY) -1200 + (ID) 2850
Total energy: -153240.0 ( -59.95 by residue)
QMean score : 0.316
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