Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSNYFALFKIEPAFNISLDELEKKYIELSKTDINER-----QSQNMENINKAYQVLKSPLKRAEHLLNLFGVRSQEDQHNFEILNESMEIREYLLDCNNLQLASGMIDEKIKDCIKNLTNNFAVKNFDEAAMQVLRLKYLYKSFEEIKNETNSNF |
2CUG Chain:A ((16-81)) | -DFDPYRVLGVSRT--ASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGPSSG-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134 for 372 contacts (-0.4/contact) +
2D Compatibility (PS) -6475 + (NN) -3523 + (LL) 6852
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -5430.0 ( -14.60 by residue)
QMean score : 0.656
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