Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKVLSIFACFLISFSSYANMFDWGTRKVSDTNTYVCNCNQGLADLVEELIPAVVNISSEQIIKQENNNRTKTPSFAPRNNFFDDFREFFEHFDQFFTDRNPSINREVVLLGSGFIIDKS-GTIVTNYHVIKNAQDITVTMNDNTYFKAEVLGYDARTDLAVLKIKADKDLSFVTFSNSDKARVGDTVMAIGNPFGLGG--SVSTGIISARSRDISIGTTSEFIQTDAAINRGNSGGPLFDLNGKVIGINTAIYSPSESGGNVGIGFAIPSNLAISIIDTLKSGKKIKHGWLGVQVQPITREFAESLGL-KDVKGALVANIVKDSPAEKGGIKVGDILLEFDGKKIDRMTQLPQMVSRTEPGKKVQIKLLRKGKEVNVKVVIEESVNDSKDSNTEENRSISDYITGLTVSNLPKEPKESKNDTPIKGVIVTNVDSNSNATLRGIKKGDIIIQLDGVDIENTENFQKQVDLAIKKSGKDSIMLLIYRNGNQFFTSIKLKK |
| 3PV3 Chain:C ((21-447)) | -------------------------------------------MAPVLKNIMPAIVNVAVQGYLP-----------------------------------------RKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA-KNLKSLVIGDSDKLEVGDFVVAIGNPFGL--SQSATFGIVSALKR----EGVENFIQTDAAINPGNAGGALVNAKGELIGIN------------VGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAV----VTDIK-SHEQKLQSNNPFLYGLALRAFEQESPPHGN---VIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQ-----TIAQEKKKELLVQVLRGPGSMYLLVI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184858 for 2973 contacts (-62.2/contact) +
2D Compatibility (PS) -40715 + (NN) -12182 + (LL) 4752
1D Compatibility (HY) -32000 + (ID) 7450
Total energy: -272453.0 ( -91.64 by residue)
QMean score : 0.496
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