Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQPLVVVCHALTGNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKKLTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSRAFNEI-A--RQAIHLGGKEGLSIARQLG-FLTYRSSKSYDE-----RFTPDEVVAYQQHQGNKFKEHFDLNCYLTLLDVLD---SHNIDR-GRTDVTHIFKNLETKVLTMGFIDDLLYPDDQVRALGERFKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 3U1T Chain:A ((16-298)) | ----------------------------VEGATIAYVDEGS--GQPVLFLHGNPTSSY---------LWRNIIP--YVVAAGYRAVAPDLIGMGD-SAKPD-----IE-YRLQDHVAYMDGFIDALGLDDM-VLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVG-EKMVLDGNFFVE-TILPEMGVVRSLSEAEMAAYRAPFPTRQ-SR--LPTL-QWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVG-AGTHFLQEDHPHLIGQGIADWLRRNKP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189854 for 2323 contacts (-81.7/contact) +
2D Compatibility (PS) -28453 + (NN) -4830 + (LL) 1504
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -232183.0 ( -99.95 by residue)
QMean score : 0.432
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