Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRDLTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKL-NASIYVSDEGKDEFNYKNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSIQ-FAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETLTLNQPAPPHHFSQMKKINQFGMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
1QH5 Chain:A ((1-177)) | MKVEVLPA-LTDNYMYLVIDDETKEAAIVDPVQP-QKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDR-IGA-------LTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPG--GSEPPAVFTGDTLFVAGCGK--FYEG----------TADEMCKALLEVLGRLPPDTRVYCGHEYTI----------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81839 for 1493 contacts (-54.8/contact) +
2D Compatibility (PS) -19135 + (NN) -10305 + (LL) 5724
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -116705.0 ( -78.17 by residue)
QMean score : 0.472
|
|
|