Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MLMEKILYQTDEFKLKPSGWYK-TIPPKKDGGTEFEIMLSGP--IAFTDRFIDPATRKEKVFLSDLNNIELVEKASILTALQLPSLI--------------------------EYGFTINEKHIRDLGF-------------VLQ-QMRSTTPL---STIYSGVGMLHTLLGPLISLDQP----YFSNEITNSTSIICDNKYDLIPKGN------------------LSEWLQMYKEEVHGNLSL------ELDVLFGVSSLVTAFLKYHNNVEFSGTI-FSFTGQSSTGKSTAAMLAASVAGNPTKGTEN-----LFRSWNATRNALEGYLSGNY--GVPIVLD-------ELSAATFHDTTGLLYSFAEGQGRQRANINGDVKTPKN--- |
| 3BWS Chain:A ((27-433)) | GTEIVKFSIHPYKGTVIRLGEEILPFKVLEMDKNIALVEMAIPVYKDE-KEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22616 for 2084 contacts (-10.9/contact) +
2D Compatibility (PS) -31548 + (NN) -1268 + (LL) -40
1D Compatibility (HY) -5200 + (ID) 3250
Total energy: -63922.0 ( -30.67 by residue)
QMean score : 0.081
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