Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASL----QNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTT-----PLQFVLVRLLQGLFGGVV----DASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAV-ITFIVCIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGM------LTALSPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYV---KSVYIFATIACGCSAILQGLATNIEFLMAARILQGLTYSALIQSVMF-----VVVNACHQQLKGTFVGTTNSMLVVGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSL--FLICSTITNQINDHTLMKLWELKQKSAK- |
| 2XDQ Chain:B ((4-443)) | -MKLAYWM-------YAGPAHIGTLRIASSFKNVHGIMHAPLGDDYFNVMRSMLERERDFTPVTASIVDRHVLARGSQEKVVDNIIRKDTEEHPDLIVLTPTCTSSILQEDLQNFVRRASLSTTADVLLADVNHYRVNELQAADRTLEQIVQFYIDKARRQGTLGTSKTPTPSVNIIGITTLGFHNQHDCRELKQLMADLGIQVNLVIPAAATVHDLQRLPQAWFNLVPYREIGGLTAQYLEREFGQPSVRITPMGVVETARCIRAIQGVLNAQGAGVNYEAFIEQQTREVSQAAWFSRSIDCQNLTGKKAVVFGD-NTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVLITDDHTVVGDAIARVEPAAIFGTQMERHVGKRLNIPCGVIAAPIHIQDFPVGYRPFLGYEGTNQLVDLIYNSFTLGMEDHLLEIFGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -380858 for 3482 contacts (-109.4/contact) +
2D Compatibility (PS) -42023 + (NN) -1333 + (LL) 1072
1D Compatibility (HY) -400 + (ID) 1750
Total energy: -425292.0 ( -122.14 by residue)
QMean score : 0.161
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