Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MQNKELIQHAAYAAIERILN--EYFREENLYQVPPQNHQWSIQLSELETLTGEFR-----------------YWSAMGH---HMYHPEVWLIDGKSKKITTYKEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNS---------------IHRTARYLQSNTIDYVED-----------RYIVSEQSLYLGHPFHPTPKSASGFSEA-----------------------------------------------DLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPTHPYQINVLRQHPQYMQYSEQGLIKDLGVSGDLVYPTSSVRTVFSKALNIYLKLPIHVKITN---FIRTNDLEQIERTI--DAAQVIASVKDEVETPHFKLMFEEGYRALLPNP-LGQTVEPEMDLLT---NSAMIVREGIPNYHADKDIHVLASLFETMPDSPISKL--AQVIEQSGLAPEAWLECYLDRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWQLVAHRLMTWKKEYANNAVFVD----CVEDLYQTPTIAAKANLMSKLNDCGANPIYTHIPNPICYNKEVSYCESNNS |
| 4R3Z Chain:B ((17-675)) | DVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALD-----VSLIERGESFYQDRMNDIVKEFEDRG-FVQVDDGRKIVFVPGCSI----PLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDR-GNTAAYLLYAFTRIRSIARLANI-------DEEMLQKA--ARETKILLDHEKEWKLGRCIL------RFPEILQKILDD------LFLHTLCDYIYELATAFTEFYDSCYCVEKDRQTGKILKV--NMWRMLLCEAVAAVMAKGFDILGIKPVQRM----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77215 for 3680 contacts (-21.0/contact) +
2D Compatibility (PS) -55883 + (NN) -1035 + (LL) 3124
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -156459.0 ( -42.52 by residue)
QMean score : 0.113
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