Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGG------VIDDIKAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTE------GKTPILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQAAK
1Y67 Chain:D ((3-212))
-AYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK
General information:
TITO was launched using:
RESULT:
Template:
1Y67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83523 for 1557 contacts (-53.6/contact) +
2D Compatibility (PS) -20592 + (NN) -4587 + (LL) 208
1D Compatibility (HY) -20400 + (ID) 5600
Total energy: -134494.0 ( -86.38 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_1Y67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y67-query.scw
PDB file :
Tito_Scwrl_1Y67.pdb
: