Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGV-TNDYKIVGMNNSQATNR-RLENLDC--NYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDV-LLMVYLSNYK-KANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYK-KEANVITNAPILNDSREF------------------KEIENFKEIVYQGQI--VMDRGYEEFIIASSAFKQ--NAPSFIIRGFGPHEEVIKELIS---YNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVIL-SPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF |
| 1VGV Chain:A ((1-370)) | MKVLTVFGT-RPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQ--PGQGLTEIT--CRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYS-------PWPEEANRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN--PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHA--WLIL------T---DSGGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVG-TDKQRIVEEVTRLLKDENEYQAMSRA----HNPYGDGQACSRILEALK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107775 for 2799 contacts (-38.5/contact) +
2D Compatibility (PS) -35997 + (NN) -8759 + (LL) 2376
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -157755.0 ( -56.36 by residue)
QMean score : 0.424
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