Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFIVIKIGGSTL--SDMHPSIINNIKHLRSNNIYPIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLF--EITSFDQQYGYVGVPTALNKDALQYLCT-KFVPIINSIGFNNHDGEFYNINADTLAYFIASSLKA-PIYVLSNIAGVLINDVVIPQLPLVDIHQYIEHGDIYGGMIPKVLDAKNAIENGCPKV-IIASGNKPNIIESIYNNDFVGTTILNS
2BTY Chain:B ((22-277))
-KTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGI-GEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI---
General information:
TITO was launched using:
RESULT:
Template:
2BTY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -217577 for 2085 contacts (-104.4/contact) +
2D Compatibility (PS) -27374 + (NN) -10088 + (LL) 196
1D Compatibility (HY) -20400 + (ID) 4900
Total energy: -280143.0 ( -134.36 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2BTY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BTY-query.scw
PDB file :
Tito_Scwrl_2BTY.pdb
: