Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKVGIVGGSGYGAIELIRLLQTHPHVTIAHIYSH-SKVDEPLKLTFPHLQH-----I-MQ-HFEALTV--DNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIKNREIYEAYYKETAAAQDDLNHAIYSISEWQSFDNNG----------------TKLISNPGCFPTATLLALHPLISEKI-VDLSSIIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIG-NHKHKPEIEQYLSIIAG----------QDVSVIFTPHLVPMTRGILSTIYVKFSSE--YTTESLHKLMTSYY----------ANQPFVRIRDIGTFPTTK--EVLGSNYC-DIGI-YVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGLNQSPVYP |
| 3HSK Chain:A ((19-377)) | VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKD-------------------VPLVVPIVNPEHIDVVENKVKQAVSKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPI--DALTTTTLQAIS------GV--SGMDILDNIVPYISGEEDKLEWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLREYECAASKLGCHSAPKQTIHVLDQPDRPQPRLDRDRDSGYGVSVGRIREDSL-LDFKMVVLSHNTIIGAAGAGILIAEILKA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211624 for 2526 contacts (-83.8/contact) +
2D Compatibility (PS) -31946 + (NN) -7818 + (LL) 2636
1D Compatibility (HY) -6800 + (ID) 2900
Total energy: -258452.0 ( -102.32 by residue)
QMean score : 0.429
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