Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRK-ERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRYK
3HSG Chain:A ((3-142))
---AYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDALNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEM----------------
General information:
TITO was launched using:
RESULT:
Template:
3HSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95978 for 1037 contacts (-92.6/contact) +
2D Compatibility (PS) -14479 + (NN) -5263 + (LL) 1800
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -127570.0 ( -123.02 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3HSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSG-query.scw
PDB file :
Tito_Scwrl_3HSG.pdb
: