Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIE------QDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
3MSZ Chain:A ((6-76))
VKIYTR-NGCPYCVW------AKQWFEE----N----NIAFDETIIDDYAQR-----SKFYDEMNQSGKVIFPISTVPQIFIDDEHIGGFT-----------------
General information:
TITO was launched using:
RESULT:
Template:
3MSZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41794 for 402 contacts (-104.0/contact) +
2D Compatibility (PS) -6984 + (NN) -1228 + (LL) 2404
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -50152.0 ( -124.76 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3MSZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MSZ-query.scw
PDB file :
Tito_Scwrl_3MSZ.pdb
: