Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEAT-WLHEASAGTLN-YEDVLYPVESVLKKDKVNFVQA-EVTKIDRDAKKVETNQ-----G-IYDFDILVVALGFVSETFGIEGMK-DHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPM-FSEELVNHAVSYLEDRGVEFKIATPIVACNEKG---FVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFEG-VKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEE-RPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF |
| 1NHP Chain:A ((1-317)) | -----MKVIVLGSSHGGYEAVEELLNLH--PDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTV------------DPEVNNVVVIGSGYIGIEAAEAFAKA-------------GKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTD--K-NAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172967 for 2454 contacts (-70.5/contact) +
2D Compatibility (PS) -32445 + (NN) -8354 + (LL) 4900
1D Compatibility (HY) -10400 + (ID) 3100
Total energy: -222366.0 ( -90.61 by residue)
QMean score : 0.458
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