Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHA--KNGY-YDGITFHRVINDFMIQGGD-PTATGMGGESIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
2ESL Chain:C ((30-171))
------------------------GRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGI-GWVSMANAGPDTNGSQFFITLTKPT----------------------------WLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSI-------
General information:
TITO was launched using:
RESULT:
Template:
2ESL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46859 for 1005 contacts (-46.6/contact) +
2D Compatibility (PS) -14550 + (NN) -6881 + (LL) 3000
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -81840.0 ( -81.43 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_2ESL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ESL-query.scw
PDB file :
Tito_Scwrl_2ESL.pdb
: