Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKIVVALGGNALGKSPQE-----QLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEK-GFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK
4JZ9 Chain:D ((8-316))---VVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAA--GVSPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGKILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRE-NKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACINYKKPDERKLEEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGKMSI-ITSLSTAVDALNGKCGTRIIK


General information:
TITO was launched using:
RESULT:

Template: 4JZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152189 for 2628 contacts (-57.9/contact) +
2D Compatibility (PS) -32987 + (NN) -15431 + (LL) 860
1D Compatibility (HY) -24800 + (ID) 6550
Total energy: -231097.0 ( -87.94 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_4JZ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JZ9-query.scw
PDB file : Tito_Scwrl_4JZ9.pdb: