Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDP---VYKEIIRLIYREEIPK--------------------------------------------------------- |
| 4LEU Chain:A ((71-252)) | KLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALAIKMF----EVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPPEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5378 for 616 contacts (-8.7/contact) +
2D Compatibility (PS) -9512 + (NN) -2667 + (LL) -84
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -22991.0 ( -37.32 by residue)
QMean score : 0.285
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