Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHH--VTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFK------DREILQS---LNGMDKYIAKGIET----KLDIVVADEKEQGVRKFLNLGHTFGHAVE--YNHKIAHGHAVMIGIIYQFIVANIL-FNSNHDIQHYINYLTKLGYP-------LETITDIDFETIYQYMLS---DKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK |
| 1NVA Chain:B ((78-372)) | ----------------------------------------------------------------PPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSAD---GGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDK---GPKKKIVLLSAIG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141504 for 1952 contacts (-72.5/contact) +
2D Compatibility (PS) -27651 + (NN) -3861 + (LL) 7200
1D Compatibility (HY) -24000 + (ID) 4900
Total energy: -194716.0 ( -99.75 by residue)
QMean score : 0.464
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