Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK----
1S12 Chain:A ((1-94))
MIKVTVT-NSFFEVT-----GHAPDKTLCASVSLLTQHVANFLKAEKKAKIKKES---------GYLKVKFEELENCEVK-VLAAMVRSLKELEQKFPSQIRVEVIDNGS
General information:
TITO was launched using:
RESULT:
Template:
1S12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40725 for 622 contacts (-65.5/contact) +
2D Compatibility (PS) -9764 + (NN) -4032 + (LL) 416
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -60805.0 ( -97.76 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1S12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S12-query.scw
PDB file :
Tito_Scwrl_1S12.pdb
: