Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTKD-PNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGN--GSFNYSKTISYTQKSYVSEV-DKQNSKSVKWGVKANEFVTP-------DGKKSAHDRYLFVQSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEK-GSSDTSEFEISYGRNLDITYATLFPRTGIYAERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN------ |
| 3LKF Chain:A ((1-299)) | ----------------------E-GKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYD---FSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISN-----GL--TAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSA-YAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDG-AKKSKITVTYQREMDLYQIRWNGFY--WAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13102 for 2209 contacts (-5.9/contact) +
2D Compatibility (PS) -29179 + (NN) -11330 + (LL) 1836
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -73775.0 ( -33.40 by residue)
QMean score : 0.429
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