Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIESIEHELEESIASLRQAGIRITPQRQAILRYLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNT-HNHYHIICEQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK
1MZB Chain:A ((3-136))
------------MVENSELRKAGLKVTLPRVKILQMLDSAQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLYVRKKK----
General information:
TITO was launched using:
RESULT:
Template:
1MZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55596 for 862 contacts (-64.5/contact) +
2D Compatibility (PS) -14468 + (NN) -4065 + (LL) 1552
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -81777.0 ( -94.87 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1MZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZB-query.scw
PDB file :
Tito_Scwrl_1MZB.pdb
: