Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA----------------------------------------- |
| 1YT3 Chain:A ((1-375)) | MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEDALPQ-----PMLNLMDMPGYRKAFKAIKSLITDVSETH----KISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5657 for 460 contacts (-12.3/contact) +
2D Compatibility (PS) -9588 + (NN) -3119 + (LL) 208
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -23306.0 ( -50.67 by residue)
QMean score : 0.526
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