Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDEAKFVLLQLYSIYLGRIDEGMSKHSASYFGSDESSFNAFFLGFNFEDYIDAVLELKHRDFVIASAEDGGFLEMALSREGIAYSESESKKDYKTLMGLIRDLKKLII
3J7A Chain:O ((51-89))
------------------------------------------------LHIMMTLKSLKSRNYVEEKYNWKHQYFI-LNNEGIEYLRE---------------------
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8791 for 194 contacts (-45.3/contact) +
2D Compatibility (PS) -4232 + (NN) -2424 + (LL) 4996
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -14101.0 ( -72.69 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: