Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------METGKSDVLDKIEKINKKDSALQEIIPKGYEIE-HHQCGVALYQLIPSKKEGEPDKKVFIT--------NTIPQITERFEDIESNEVSFNMLFYDNKTPV---------NIAVSAEEISDS-----RQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKG------YFIYPYQEVMKD-------SNVKLFSNDKGFQKLI-----DSFRSKGTLQGYSK--------KVFAQIKDLPMVM-VMLYASLGSVL---LREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIE------SMASFLNSFPMF-KDDTRNTHPKFVTSTTYNFSSGESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDPPYPDNFDFTTLDKSFRENYGT---------LGLAFIKQYESKKDVYKNAFESYQRYFNQKG---SNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIVGDGYDSVNYGDVKAVYKHDFLCIKNETVKNKL---GHEMQTITGQWDKKGYLIKDKKRIQKQVKH------KSQRHLGYAIKKEIIEELGFDFSI-SHNPYTESY |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAP-SVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMT---SAGFTPCITTYNALLNVLSRQGD--WSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRR---LDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 78958 for 4168 contacts (18.9/contact) +
2D Compatibility (PS) -57479 + (NN) -3750 + (LL) 908
1D Compatibility (HY) -14800 + (ID) 4600
Total energy: -763.0 ( -0.18 by residue)
QMean score : 0.195
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