Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRKYTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFAFFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMIGLRAYFNKNIVPMKDNLQMNAIKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSSINLNMIDLSRSIGIILDNAIEASTEIDDPIIRVAFIE----------SENSVTFIVMNKCADDIPRIHELFQESFSTKGEGRGLGLSTLKEIADNADNVLLDTII-ENGFFIQKVEIINN |
| 1R62 Chain:A ((217-348)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPE-GGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGI-------------------GLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54255 for 695 contacts (-78.1/contact) +
2D Compatibility (PS) -11044 + (NN) 498 + (LL) 24648
1D Compatibility (HY) -800 + (ID) 800
Total energy: -41753.0 ( -60.08 by residue)
QMean score : 0.435
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