Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4QBH Chain:B ((1-215))
MNLVLMGLPGAGKGTQAERIVEAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLGKDDCERGFLLDGFPRTVAQAEALEEILEEIGRPIDYVIHIEVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEETVAKRLEVNMKQMKPLLDFYEQKGYLRNVNGQQDMQDVFADVRELLGGL
General information:
TITO was launched using:
RESULT:
Template:
4QBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78386 for 1690 contacts (-46.4/contact) +
2D Compatibility (PS) -22927 + (NN) -11201 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7000
Total energy: -145914.0 ( -86.34 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_4QBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBH-query.scw
PDB file :
Tito_Scwrl_4QBH.pdb
: