Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIPKDPKRIAVVAP-TYAGGLKKLGANIVAVNQQVDQ--SKV------LK------DKFKGVTKIGDGDVEKVAKEKPDLIIVYST-DKDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWEETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQKLTAKAGWAEVKQEEIEKYAGDYIVSTSEGKP-------TPGYE-STNMW-KNLKATKEGHIVKVDAGTYWYNDPYTLDFMRKDLKEKLIKAAK |
| 3BE6 Chain:A ((2-291)) | ----------------------------PVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGT-ADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLKGGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDS---QKITVSVIQANQGKINVMHSYHS--LGRVLRDAGFRFPPLIESI-PEGGRMDVSAERLPELDADFVFATWRGDTGGKPQDELATMEKVMPGWCQFLTACRSGRYVLISREEAISNSFASLGLMAAQIQSQIAGR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34220 for 2118 contacts (-16.2/contact) +
2D Compatibility (PS) -28741 + (NN) -12685 + (LL) 3060
1D Compatibility (HY) -13200 + (ID) 2900
Total energy: -88686.0 ( -41.87 by residue)
QMean score : 0.464
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