Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKE-RGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDM-ADQVIVGTQEGVKILEK
3ENW Chain:B ((41-235))
------------------------VGVGTGSTVNHFIDALGTMSEEIKGAVSSSVASTEKL----EALGIKIFDCNEVASLDIYVDGADEINADREMIKGGGAALTREKIVAAIADKFICIVDGTKAVDVLG-TFPLPVEVIPMARSYVARQLVKLGGDPCYRE-----GVITDNGNVILDVYGMKITNPKQLEDQINAIPGVVTVGLFAHRGADVVITGTPEGAKIEE-
General information:
TITO was launched using:
RESULT:
Template:
3ENW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98265 for 1573 contacts (-62.5/contact) +
2D Compatibility (PS) -20643 + (NN) -3694 + (LL) 2984
1D Compatibility (HY) -14400 + (ID) 3850
Total energy: -137868.0 ( -87.65 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_3ENW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ENW-query.scw
PDB file :
Tito_Scwrl_3ENW.pdb
: