Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLY---DTNGNKYLDGYASLWVNVHGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASVEIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSV----GGIKTFHKIFKDLIFENIQVESPSFYRSNYDTENEIMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFLKEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLTSQKIYNTFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQLHALKRHRNVGDVRGRGLMFGVEL--VTDKDSKTPLEIEKVERIVRKCKENGLMIRNLENVITFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC |
4W1W Chain:B ((4-412)) | ----EQIIAVDGAHLWHPYSSIG-REAVSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRG---RGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGM---HSLWTDVL--AAQVFAPQVPR-DYDP------AYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAG--ALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDRPVDLAVATPAALDR-----------GVWLRPFRNLVYAMPPYICTPAEI------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4W1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -198958 for 3360 contacts (-59.2/contact) +
2D Compatibility (PS) -43139 + (NN) -9715 + (LL) 4856
1D Compatibility (HY) -35200 + (ID) 7050
Total energy: -289206.0 ( -86.07 by residue)
QMean score : 0.412
|
|
|