Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIRLD------NNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSSFPKLDVDNRFYYRNLKD
2DXQ Chain:A ((4-143))
DAISLRAAGPGDLPGLLELYQVLNPSDPE--LTT--QEAGAVFAAMLAQPGLTIFVATEN-GKPVATATLLIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQNKT-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2DXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61423 for 906 contacts (-67.8/contact) +
2D Compatibility (PS) -14074 + (NN) -5914 + (LL) 684
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -85877.0 ( -94.79 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2DXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXQ-query.scw
PDB file :
Tito_Scwrl_2DXQ.pdb
: