Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILG-EIFKYFMDYHP---IFKTLLGVVVAIQFTVPALIGALVAMKFDLSPLAIAVV----ASAAYVGSGAAQFKNGAWMITGIGDLINT------------MITAAIAVLFILLIQHRVGSMALIVFPTVVGGI-SGAIGVLILPYTKMITTAIGNMVNGFT-----ELQPIVMSILISMVFSLIII--SPLSTVAIAFAIGITGLAAGSASIGISATEAVLIIGTSKVNRLGVPLSVFFGGVKMMIPNMVKYPIL---------MLPILTTAIVSGLVSALVGIHGTKESAG-FGFIGMVGP--INAFKFMEVDSAWL-----------------------SVLLIVVAFFVVPFVTAWLADIIYRKVFRLYTNDIFKFMG----------- |
| 4RU0 Chain:A ((30-444)) | --------GPDQQFFPLATYRVGAYASSGVQVWAGMIDYLNYINQVEGGINGVKLVWQECETEWTAEKGIECYERFKNGLDGAPVAVYQPNGAPAAYALSERAEVDKIPLITLGYGRTEATDGTVFPYNFPVMLTFYSEASTLVNYIAQREGGFDRLKGKKIATLYHDSAYGRETLGPLKLLAEKYGFENIQIPVADPGNEQSAQWRQIRQQNPDWVFLRTWGVSTPVAVKTAARFGFPVDHIIGDIWASSSEDVLPAGAAAKGYLALTPYPAGSDFEIHKRLKQYILDTGKSDLKDLKNFGSVYYNSGLVNAAVAVEAIRTAQGKFGKRPLNGEEGRWGLEHLNIDDARLKDMGYLGLMQNLKLSCRDHEGGGAARVQQWDGANWTLISEWIA--ADRALLRPLIDEKAAAFAKEKRLVPRTCN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -367191 for 2723 contacts (-134.8/contact) +
2D Compatibility (PS) -34951 + (NN) 5169 + (LL) 936
1D Compatibility (HY) 1600 + (ID) 3000
Total energy: -397437.0 ( -145.96 by residue)
QMean score : 0.213
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