Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
| 1VZ0 Chain:A ((23-209)) | ----------------------------VVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRPQG-DGYELVAGERRYRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLE-MGLTQEEVARRVGKARSTVANALRLLQLPPEALEALERGEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAEAL-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12853 for 1397 contacts (9.2/contact) +
2D Compatibility (PS) -20687 + (NN) -14659 + (LL) 6240
1D Compatibility (HY) -13600 + (ID) 4150
Total energy: -34003.0 ( -24.34 by residue)
QMean score : 0.783
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