Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFLGALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNE-LKIFGWHYIIETGRIYNYNFESHFFEPIEETIKQRISHENF
3QY1 Chain:A ((8-216))
DTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHT-----DLNCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAVENP------ELGLINNWLLHIRDIWLKHSSLL-GKMPEEQRLDALYELNVMEQVYNLGHSTIMQSAWKRGQNVTIHGWAYSINDGLLRDLDVTATNRETLENGYHKGISALSL
General information:
TITO was launched using:
RESULT:
Template:
3QY1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121877 for 1570 contacts (-77.6/contact) +
2D Compatibility (PS) -22191 + (NN) -7976 + (LL) 744
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -165400.0 ( -105.35 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_3QY1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QY1-query.scw
PDB file :
Tito_Scwrl_3QY1.pdb
: