Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAV--SHKISEGCKC----VKEGDVIAFGKYKGAEIVLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH
1P3H Chain:B ((3-97))
VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34472 for 537 contacts (-64.2/contact) +
2D Compatibility (PS) -9572 + (NN) 2033 + (LL) 468
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -49493.0 ( -92.17 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_1P3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3H-query.scw
PDB file :
Tito_Scwrl_1P3H.pdb
: