Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKALLKQFEDAFKKENIECESV--LKSGDLIDVVLDMAKDYDLLLIGASESNLLYR-LFISHQNSLVEQSSIPVVIAK
3LOQ Chain:A ((23-161))
NAMLLPTDLSENSFKVLEYLGDFKKVG-VEEIGVLFVINLTKL-----GIDIDHYIDEMSEKAEEVLPEVAQKIEAAGIKAEVIKPFPAGDPVVEIIKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVYIFK
General information:
TITO was launched using:
RESULT:
Template:
3LOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97428 for 975 contacts (-99.9/contact) +
2D Compatibility (PS) -14233 + (NN) -6806 + (LL) 32
1D Compatibility (HY) -7200 + (ID) 1050
Total energy: -126685.0 ( -129.93 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3LOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LOQ-query.scw
PDB file :
Tito_Scwrl_3LOQ.pdb
: