Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRFFLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMRILGLEKKTRFYQASTSELYGE-----VLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLFAVNGILFNHE-----SRVRGETFVTRKITRAASAIAYNLTDCLYLGNLD--AKRDWGHAKDYVKMMHLMLQA--PTPQDYVIATGKTTSVRDFVKMSFEFIGIDLEFQNTGIKEIGLIKSVDEKRANALQLNLSHLKTGKIVVRIDEHYFRPTEVDLLLGDPTGAEKELGWVREYDLKELVKDMLEYDLKECQKNLYLQDGGYTLRNFYE |
| 1DB3 Chain:A ((1-357)) | --SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKR----------------------PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF--YPR---SPYAVAKLYAYWITVNYRESYG-MYACNGILFNHESPRRGE----TFVTRKITRAIANIAQGLESCLYLGN--MDSLRDWGHAKDYVKMQWMMLQ-QE-QPEDFVIATGVQYSVRQFVEMAAAQLG--IKLRFEGTGVEEKGIVVSVTGHDA-----PGVKPGDVIIAVDPRY-FRPAEETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE---AAKKHS----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129229 for 2709 contacts (-47.7/contact) +
2D Compatibility (PS) -33475 + (NN) -3104 + (LL) 3172
1D Compatibility (HY) -28400 + (ID) 8700
Total energy: -199736.0 ( -73.73 by residue)
QMean score : 0.396
|
|
|