Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSVTLACGNGGKETNALIERVFMPYLKEWIVAFDEDA-PKFEASGEYCVSTDSFVITPLIF---NGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEIPLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIKPGISSRHLQQGQAIILSDTIANHGASLFATRHEI-KLK----TNLQSDCQLLYPLLKPLFLS-DLKIDALRDATRGGLASVLNEWANSSRVKIVIEEEKIPLKEETKGICEILGLEPYALANEG----VFVLALNQKDAPKALEILKSNEKAKNACVIGGVFENPYPSVVLKNAWGFERILEMPEGELLPRIC |
3C9U Chain:A ((59-326)) | -------------------------------VIGDDTAPVEYC-SKKLLLTTDVLNEGVHFLRSYIPEAVGWKAISVNVSDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYKCEVVGGNISKSE-----KIGISVFLVGETE-RFVGRDGARLGDSVFVSGTLGDSRAGLELLLMEKEEYEPFELALIQRHLRPTARI--DYVKHIQKYANASMDISD-GLVADANHLAQRSGVKIEILSEKLPLSNELKMYCEKYGKNPIEYALFGGEDYQLLFTHPKERWNPFL----------DMTEIGRVE-EGEGVFVDGKKVEPKGWKHF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137997 for 2097 contacts (-65.8/contact) +
2D Compatibility (PS) -25966 + (NN) 293 + (LL) 4136
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -170584.0 ( -81.35 by residue)
QMean score : 0.362
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