Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRFISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFNKPKNEKYLRPLILKSPVVSGIERVKHPTQKSLTLMEKIISTH-TNPNDTVLDPFMGSGTTGLACKNLK----------------------------------------RNFIGIESEKEYFQIAQKRLS |
3K0B Chain:A ((180-283)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------QGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6192 for 418 contacts (14.8/contact) +
2D Compatibility (PS) -7051 + (NN) -5067 + (LL) 12464
1D Compatibility (HY) -3600 + (ID) 650
Total energy: 2288.0 ( 5.47 by residue)
QMean score : 0.484
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