Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MEVKDRLNFNFVATTH-SAMDLIASVLSDSKYYLESFYNQASQELGDKRSDKGEKLAELFDLLFEYIKDSKFERLKEPSAYDYSCKKLYPEQNTSQKMRRVV-LRGYKHNDKMYHTIVD-MGS-------- |
| 3DKA Chain:A ((6-154)) | NQIVSHFLSHRNVTNELAEKISKDHYSYKPAETSMSAEELVKHILTSFHLFANVIKEGNASPFQNTETDLNVLAKTYTEKTVAILEQLTEEQLDREIDAFG-------RKVTGRALLQLAMEHEIHHKGNLFVYVREMGHTELPFYQQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7920 for 705 contacts (11.2/contact) +
2D Compatibility (PS) -11899 + (NN) -4697 + (LL) 284
1D Compatibility (HY) -400 + (ID) 550
Total energy: -9342.0 ( -13.25 by residue)
QMean score : 0.304
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